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July 17, 2013
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July 22-25, 2013
The 2013 World Congress in Computer Science, Computer Engineering, and Applied Computing

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BIOCOMP'13: Tuesday, July 23, 2013 Schedule

Last modified 2013-07-10 19:25

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08:00 - 10:20am   During this period, BIOCOMP attendees are encouraged to participate
                  in sessions belonging to ESA'13, GEM'13, ICAI'13, ICOMP'13, IKE'13,
                  PDPTA'13, or SWWS'13 conferences. These sessions discuss topics
                  that significantly overlap the scope of BIOCOMP'13.

                  July 23, 2013 (Tuesday)
                  (LOCATION: Cohiba 8-9)

                  Co-Chairs: Abhishek Narain Singh, Adjunct Faculty, Computer Science,
                             Virginia Tech, USA
                  July 23, 2013 (Tuesday); 11:00am - 12:20pm
                  (LOCATION: Montecristo 3)

11:00 - 11:20am:  Cloud-Accelerated Data-Mining for Putative Heteromeric Transcription
                  Factors and Target Genes Using Microarray Gene Expression Profiles
                  Edward A. Salinas and Amitava Karmaker
                  Independent Researcher, Rockville, Maryland, USA;
                  University of Wisconsin - Stout, Wisconsin, USA

11:20 - 11:40am:  Mining Accurate Shared Decision Trees from Microarray Gene Expression
                  Data for Different Cancers
                  Guozhu Dong and Qian Han
                  Wright State University, Dayton, Ohio, USA

11:40 - 12:00pm:  Laterality of Motor Control or Raised Intracranial Pressure: Physiology vs
                  Physics in Explaining Ipsilateral Signs in Supratentorial Lesions in Human
                  Iraj Derakhshan
                  Formerly, Associate Professor of Neurology, Case Western Reserve and
                  Cincinnati Universities, USA;
                  Practicing MD, Neurologist, Charleston, West Virginia, USA

12:00 - 12:20pm:  Analysis on Low Prevalence of RAS Mutations in Human Papillary
                  Thyroid Cancer
                  Shaukat Iqbal Malik, Zoya Khalid1, S. Sameen
                  Atta-ul-Rahman School of Applied Biosciences (ASAB), National University
                  of Sciences & Technology (NUST), Pakistan; Sabanci University, Turkey

12:20 - 01:20pm:  LUNCH (On Your Own)

                  Co-Chairs: Dr. Ananda Mondal, Claflin University, USA;
                             Prof. Steven M. Carr,
                             Memorial University of Newfoundland, Canada;
                             Abhishek Narain Singh, Adjunct Faculty Virginia Tech, USA
                  July 23, 2013 (Tuesday); 01:20pm - 06:00pm
                  (LOCATION: Montecristo 3)

01:20 - 01:40pm:  Using Bioinformatics Shotgun Method and Hamilton Path for DNA
                  Sequence Assembly
                  Michael Shan-Hui Ho, Kun-Yu Hung, Yu-Shiang Gen,
                  Chao-Chang Chiu, and Pin-Shuo Huang
                  National Taipei University, Taiwan, ROC;
                  Ming Chuan University, Taiwan; Yuan Ze University, Taiwan, ROC

01:40 - 02:00pm:  A Logical Model for Metabolic Networks With Inhibition
                  Robert Demolombe, Luis Farinas del Cerro, Naji Obeid
                  Universite de Toulouse and CNRS, IRIT, Toulouse, France

02:00 - 02:20pm:  A Novel Approach for Heuristic Pairwise DNA Sequence Alignment
                  Beat Wolf and Pierre Kuonen
                  University of Applied Sciences Western Switzerland, Switzerland

02:20 - 02:40pm:  A Framework for a General-Purpose Sequence Compression Pipeline:
                  A Centroid Based Compression
                  Liqing Zhang, Daniel Nasko, Martin Triska, Skip Garner
                  Virginia Tech, Virginia, USA; Center for Bioinformatics and
                  Computational Biology, University of Delaware, USA; Glamorgan
                  Computational Biology Research Group, University of Glamorgan, UK

02:40 - 03:00pm:  Classification of DNA Sequences by a MLP and SVM Network
                  Terje Kristensen and Fabien Guillaume
                  Begen University College, Norway;
                  Pattern Solutions Ltd., Norway

03:00 - 03:20pm:  BREAK

03:20 - 03:40pm:  Parallelization of Composition Vector Method for Sequence
                  Similarity Analysis
                  Manoj Gupta, Aniket Mittal, Rajedeep Niyogi, Manoj Mishra
                  Indian Institute of Technology, Roorkee, India

03:40 - 04:00pm:  Majority logic decoding: a discrete method for detecting
                  differential expression in RNA-Seq data
                  Roberto Arce Corretjer and Humberto Ortiz-Zuazaga
                  University of Puerto Rico, Rio Piedras, Puerto Rico

04:00 - 04:20pm:  Research on Genome Characteristics for Minimal Genome Designing
                  Tool in Streptococcus
                  Chung S Rhee, Sehi Lyi, Whi Ju Hong, Sehee Jeong, Young-Chang Kim,
                  and Dae Hyun Chung
                  Chungbuk National University, Korea

04:20 - 04:40pm:  V.I.S SYSTEM (2) - DNA Sequencing and Reading From Eye Photo
                  Boucherit Taieb
                  Boucherit Laboratory, Oran, Algeria

04:40 - 05:00pm:  New Perspectives of Barcoding of Biotechnological Bacterial
                  Strains by Using NGS Data
                  Reva O.N., Chan W.Y., Bezuidt O., Lapa S.V., Safronova L.A.,
                  Avdeeva L.V., and Borriss R.
                  University of Pretoria, Hillcrest, Pretoria, South Africa;
                  Institute of Microbiology & Virology NAS of Ukraine, Kiev, Ukraine;
                  ABiTEP CmbH, Glienicker Weg, Berlin, Germany

05:00 - 05:20pm:  Biomimetic Pattern Recognition for Cancer Detection Using DNA
                  Microarray Data
                  Charles H. Lee and Leonila Lagunes
                  California State University, Fullerton, California, USA

05:20 - 05:40pm:  Multiple Sequence Alignments Using Motif Assembly
                  Charnelle Smoak, Alex Ropelewski, Albert Esterline
                  North Carolina A&T State University, North Carolina, USA;
                  Pittsburgh Supercomputing Center, Pittsburgh, PA, USA

05:40 - 06:00pm:  Known Knowns, Known Unknowns, and Unknown Unknowns - CS for analysis
                  of multidimensional DNA matrices in Evolutionary Genomics
                  Steven M. Carr
                  Memorial University of Newfoundland, Canada

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